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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015918858.1_cds_XP_016468208.1_60873
CDS Infomation

[gene=LOC107790758] [db_xref=GeneID:107790758] [protein=cryptochrome-1-like] [protein_id=XP_016468208.1] [location=complement(join(27685..28191,29092..29798,30063..30281,31768..32080))] [gbkey=CDS]
Sequence

ATGTCAAGTGGTGGTTGTAGCATAGTATGGTTTAGGAGGGATCTGAGGTTAGAAGATAAC
CCAGCACTGGCTGCTGGAGTGAGAGCAGGTGCAGTAATTGCATTGTTTATATGGGCTCCT
GAAGAAGAAGGATATTATTGTCCTGGTAGGGTATCAAGATGGTGGATTAAACAAAGTTTA
GCTCATCTTGATTCCTCTTTGAAGAGCCTTGGAACTTCCCTAATTACAAAGAGATCTACT
GATAGTATTTCTTCTCTTCTTGATGTTGTGAAATCTACTGGTGCAACTCAGGTCTTTTTC
AATCATCTATATGACCCAATATCACTTGTCAGGGATCATCGTGCAAAGGAAGCCTTAACA
GCTGAAGGTGTATCTGTGCGCTCCTTCAATGCTGATTTACTATACGAACCATGGGAAGTT
GTCGATGATGAAGGTCGCCCATTCACAACGTTTTCAGCTTTCTGGGACAGATGCCTTACC
ATGCCTTATGACCCTGAAGCTCCACTTCTTCCACCTAAAAGGATAATATCTGGAGATGCA
TCAAGATGCCCTTCAGACAACTTGGTATTTGAGAGCGAATCAGAGAAAGGAAGCAACGCA
CTTCTTGCTCGAGCGTGGTCTCCTGGTTGGAGCAATGCTGACAAGGCACTGGCTACTTTC
ATTAATGGACCATTAATTGAGTATTCCAAGAATCGTAGGAAAGCTGATACTGCAACAACC
TCATTTCTGTCCCCACGTTTACATTTTGGTGAAGTCAGTGTTCGTAAGGTATTCCATCGT
ATTCGTATCAAGCAAGTTCTCTGGGCCAATGAAGGAAACAAAGAAGGTGAAGAAAGTACC
AACTTGTTCATCAAGTCCATTGTCCTTAGAGAGTTCTCAAGATACATGAGCTCTAATCAT
CCTTACAGTCATGAAAGACCACTACTTGGTCACCTAAAGTACTTCCCTTGGTTAGTAGAT
GAGGGCTATTTTAAGGCTTGGAGACAAGGTAGAACAGGTTATCCTTTGGTTGATGCAGGT
ATGAGAGAGCTTTGGGCTACTGGCTGGCTACATGATCGCATTCGAGTTGTTGTTTCTACT
TTTTCTATTAAGGTTCTGCAGCTTCCTTGGACATGGGGAATGAAGTATTTCTGGGACACT
TTGTTAGATGCAGATCTTGAAAGTGATGCTCTCGGTTGGCAATATATTACCGGTACCCTA
CCTGATGGTTGTGAGTTTGATCAATTTTATAATCCACAGTTTGAGGGATACAAGTTTGAT
CCTAAAGGAGAATATGTTCGCCGATGGCTTCCTGAACTTGCTAGACTGCCCACTGAATGG
ATACACCACCCTTGGGATGCACCAGAACCTGTACTTCAAGCTGCTGGCATTGAGCTTGGT
TACAATTATCCTCTTCCGATTGTTGAAATCGATGCAGCAAAAGAAAGACTAGAAGACGCC
CTATCACAAATGTGGCAGCGTGAAGCAGCTACAAGAGCTTCTATTGAGAATGGAATGGAG
GAAGGACATGGCGACTCTACCGATTTTGTCCCAATAGCATTTCCTCAGGCCATGCAGATG
GAAATGGATCCTGAAACAGCCAGGAACAATACTACAAGAAATGCTATTCGATGTTATGAT
GATCAGATAGTCCCTAGCATGTCATCTTCTTTTTTTAGAACTGAAGATGAAGAATCCTCT
GTGGATATCAGAAATTCAGTTGTGGAGAGTAGAGCAGAAGTTCCAATAATGTTGATGTAT
AACTGA

Peptide Sequence

PEP ID

XP_016468208.1
PEP Infomation

PREDICTED: cryptochrome-1-like [Nicotiana tabacum]
Sequence

MSSGGCSIVWFRRDLRLEDNPALAAGVRAGAVIALFIWAPEEEGYYCPGRVSRWWIKQSL
AHLDSSLKSLGTSLITKRSTDSISSLLDVVKSTGATQVFFNHLYDPISLVRDHRAKEALT
AEGVSVRSFNADLLYEPWEVVDDEGRPFTTFSAFWDRCLTMPYDPEAPLLPPKRIISGDA
SRCPSDNLVFESESEKGSNALLARAWSPGWSNADKALATFINGPLIEYSKNRRKADTATT
SFLSPRLHFGEVSVRKVFHRIRIKQVLWANEGNKEGEESTNLFIKSIVLREFSRYMSSNH
PYSHERPLLGHLKYFPWLVDEGYFKAWRQGRTGYPLVDAGMRELWATGWLHDRIRVVVST
FSIKVLQLPWTWGMKYFWDTLLDADLESDALGWQYITGTLPDGCEFDQFYNPQFEGYKFD
PKGEYVRRWLPELARLPTEWIHHPWDAPEPVLQAAGIELGYNYPLPIVEIDAAKERLEDA
LSQMWQREAATRASIENGMEEGHGDSTDFVPIAFPQAMQMEMDPETARNNTTRNAIRCYD
DQIVPSMSSSFFRTEDEESSVDIRNSVVESRAEVPIMLMYN

Transcript Sequence

Gene sequence data has not been registered.